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#------------------------------------------------------------------------------
# $File: scientific,v 1.7 2010/09/20 19:19:17 rrt Exp $
# scientific: file(1) magic for scientific formats
#
# From: Joe Krahn <krahn@niehs.nih.gov>
########################################################
# CCP4 data and plot files:
0 string MTZ\040 MTZ reflection file
92 string PLOT%%84 Plot84 plotting file
>52 byte 1 , Little-endian
>55 byte 1 , Big-endian
########################################################
# Electron density MAP/MASK formats
0 string EZD_MAP NEWEZD Electron Density Map
109 string MAP\040( Old EZD Electron Density Map
0 string/c :-)\040Origin BRIX Electron Density Map
>170 string >0 , Sigma:%.12s
#>4 string >0 %.178s
#>4 addr x %.178s
7 string 18\040!NTITLE XPLOR ASCII Electron Density Map
9 string \040!NTITLE\012\040REMARK CNS ASCII electron density map
208 string MAP\040 CCP4 Electron Density Map
# Assumes same stamp for float and double (normal case)
>212 byte 17 \b, Big-endian
>212 byte 34 \b, VAX format
>212 byte 68 \b, Little-endian
>212 byte 85 \b, Convex native
############################################################
# X-Ray Area Detector images
0 string R-AXIS4\ \ \ R-Axis Area Detector Image:
>796 lelong <20 Little-endian, IP #%d,
>>768 lelong >0 Size=%dx
>>772 lelong >0 \b%d
>796 belong <20 Big-endian, IP #%d,
>>768 belong >0 Size=%dx
>>772 belong >0 \b%d
0 string RAXIS\ \ \ \ \ R-Axis Area Detector Image, Win32:
>796 lelong <20 Little-endian, IP #%d,
>>768 lelong >0 Size=%dx
>>772 lelong >0 \b%d
>796 belong <20 Big-endian, IP #%d,
>>768 belong >0 Size=%dx
>>772 belong >0 \b%d
1028 string MMX\000\000\000\000\000\000\000\000\000\000\000\000\000 MAR Area Detector Image,
>1072 ulong >1 Compressed(%d),
>1100 ulong >1 %d headers,
>1104 ulong >0 %d x
>1108 ulong >0 %d,
>1120 ulong >0 %d bits/pixel
# Type: GEDCOM genealogical (family history) data
# From: Giuseppe Bilotta
0 search/1/c 0\ HEAD GEDCOM genealogy text
>&0 search 1\ GEDC
>>&0 search 2\ VERS version
>>>&1 search/1 >\0 %s
# From: Phil Endecott <phil05@chezphil.org>
0 string \000\060\000\040\000\110\000\105\000\101\000\104 GEDCOM data
0 string \060\000\040\000\110\000\105\000\101\000\104\000 GEDCOM data
0 string \376\377\000\060\000\040\000\110\000\105\000\101\000\104 GEDCOM data
0 string \377\376\060\000\040\000\110\000\105\000\101\000\104\000 GEDCOM data
# PDB: Protein Data Bank files
# Adam Buchbinder <adam.buchbinder@gmail.com>
#
# http://www.wwpdb.org/documentation/format32/sect2.html
# http://www.ch.ic.ac.uk/chemime/
#
# The PDB file format is fixed-field, 80 columns. From the spec:
#
# COLS DATA
# 1 - 6 "HEADER"
# 11 - 50 String(40)
# 51 - 59 Date
# 63 - 66 IDcode
#
# Thus, positions 7-10, 60-62 and 67-80 are spaces. The Date must be in the
# format DD-MMM-YY, e.g., 01-JAN-70, and the IDcode consists of numbers and
# uppercase letters. However, examples have been seen without the date string,
# e.g., the example on the chemime site.
0 string HEADER\ \ \ \
>&0 regex/1 \^.{40}
>>&0 regex/1 [0-9]{2}-[A-Z]{3}-[0-9]{2}\ {3}
>>>&0 regex/1s [A-Z0-9]{4}.{14}$
>>>>&0 regex/1 [A-Z0-9]{4} Protein Data Bank data, ID Code %s
!:mime chemical/x-pdb
>>>>0 regex/1 [0-9]{2}-[A-Z]{3}-[0-9]{2} \b, %s
# Type: GDSII Stream file
0 belong 0x00060002 GDSII Stream file
>4 byte 0x00
>>5 byte x version %d.0
>4 byte >0x00 version %d
>>5 byte x \b.%d